Protein Data Bank format

Code name: pdb

Marvin imports and exports simple PDB files containing the following records:

Import options. For PDB files without known residues and CONECT records, bond guessing is done in the same way as in XYZ import. Import options are also the same: {f...}, {b}, {Z#}.

Export options can be specified in the format string. The format descriptor and the options are separated by a colon.

H or +H     Add explicit Hydrogen atoms. Example: "pdb:H"
-H     Remove explicit Hydrogen atoms. Example: "pdb:-H"
-c     Do not write connections in output. Example: "pdb:-c"
Restrictions of the PDB format: Limitations: